Gene

smoc2

ID
ZDB-GENE-021031-5
Name
SPARC related modular calcium binding 2
Symbol
smoc2 Nomenclature History
Previous Names
  • cb488 (1)
  • wu:fb75d10
  • zgc:112171
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity. Acts upstream of or within several processes, including embryonic viscerocranium morphogenesis; myeloid cell development; and regulation of BMP signaling pathway. Predicted to be located in collagen-containing extracellular matrix and extracellular region. Is expressed in several structures, including digestive system; ectoderm; nervous system; notochord; and optic vesicle. Orthologous to human SMOC2 (SPARC related modular calcium binding 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
10 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
8 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smoc2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
dentin dysplasia Alliance Dentin dysplasia, type I, with microdontia and misshapen teeth 125400
1 - 1 of 1
Associated With smoc2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Domain IPR000716 Thyroglobulin type-1
Domain IPR002350 Kazal domain
Domain IPR019577 SPARC/Testican, calcium-binding domain
Family IPR051950 Developmental regulator and protease inhibitor
1 - 5 of 7 Show all
Domain Details Per Protein
Protein Additional Resources Length Developmental regulator and protease inhibitor EF-Hand 1, calcium-binding site EF-hand domain pair Kazal domain SPARC/Testican, calcium-binding domain Thyroglobulin type-1 Thyroglobulin type-1 superfamily
UniProtKB:A0AB32T1Q2 InterPro 463
1 - 1 of 1
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smoc2-201 (1) Ensembl 507 nt
mRNA smoc2-202 (1) Ensembl 1,314 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations