Gene
btaf1
- ID
- ZDB-GENE-021025-1
- Name
- BTAF1 RNA polymerase II, B-TFIID transcription factor-associated
- Symbol
- btaf1 Nomenclature History
- Previous Names
-
- TAFII (1)
- wu:fd60h10
- wu:fe26c12
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Description
- Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and TBP-class protein binding activity. Predicted to be located in nucleus. Orthologous to human BTAF1 (B-TFIID TATA-box binding protein associated factor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Allele | Type | Localization | Consequence | Mutagen | Supplier |
---|---|---|---|---|---|
sa8540 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa9449 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa10826 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa12382 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa22370 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa22371 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa31958 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa42285 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa42286 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | Armadillo-like helical | Armadillo-type fold | HEAT repeat | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | Mot1, ATP-binding domain | Mot1, central domain | P-loop containing nucleoside triphosphate hydrolase | SNF2-like, N-terminal domain superfamily | SNF2, N-terminal | SNF2/RAD5-like, C-terminal helicase domain | TATA-binding protein-associated factor Mot1 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M2BGW0 | InterPro | 1861 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH211-129M12 | ZFIN Curated Data | |
Contained in | BAC | DKEY-221J11 | ZFIN Curated Data | |
Encodes | EST | fb79b10 | Langenau et al., 2002 | |
Encodes | EST | fd60h10 | ||
Encodes | EST | fe26c12 |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001159406 (1) | 5577 nt | ||
Genomic | GenBank:BX530089 (1) | 105348 nt | ||
Polypeptide | UniProtKB:A0A8M2BGW0 (1) | 1861 aa |
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Huang, H.T., Kathrein, K.L., Barton, A., Gitlin, Z., Huang, Y.H., Ward, T.P., Hofmann, O., Dibiase, A., Song, A., Tyekucheva, S., Hide, W., Zhou, Y., and Zon, L.I. (2013) A network of epigenetic regulators guides developmental haematopoiesis in vivo. Nature cell biology. 15(12):1516-1525
- Woods, I.G., Wilson, C., Friedlander, B., Chang, P., Reyes, D.K., Nix, R., Kelly, P.D., Chu, F., Postlethwait, J.H., and Talbot, W.S. (2005) The zebrafish gene map defines ancestral vertebrate chromosomes. Genome research. 15(9):1307-1314
- Langenau, D., Palomero, T., Kanki, J., Ferrando, A., Zhou, Y., Zon, L., and Look, A. (2002) Molecular cloning and developmental expression of Tlx (Hox11) genes in zebrafish (Danio rerio). Mechanisms of Development. 117(1-2):243-248
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