Gene

btaf1

ID
ZDB-GENE-021025-1
Name
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated
Symbol
btaf1 Nomenclature History
Previous Names
  • TAFII (1)
  • wu:fd60h10
  • wu:fe26c12
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and TBP-class protein binding activity. Predicted to be located in nucleus. Orthologous to human BTAF1 (B-TFIID TATA-box binding protein associated factor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa8540Allele with one point mutationUnknownPremature StopENU
sa9449Allele with one point mutationUnknownPremature StopENU
sa10826Allele with one point mutationUnknownSplice SiteENU
sa12382Allele with one point mutationUnknownPremature StopENU
sa22370Allele with one point mutationUnknownSplice SiteENU
sa22371Allele with one point mutationUnknownSplice SiteENU
sa31958Allele with one point mutationUnknownSplice SiteENU
sa42285Allele with one point mutationUnknownPremature StopENU
sa42286Allele with one point mutationUnknownPremature StopENU
1 - 9 of 9
Show
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-btaf1N/AHuang et al., 2013
1 - 1 of 1
Show
Human Disease
Associated With btaf1 Human Ortholog
No data available
Associated With btaf1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000330 SNF2, N-terminal
Domain IPR001650 Helicase, C-terminal domain-like
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR022707 Mot1, central domain
Domain IPR044078 Mot1, ATP-binding domain
1 - 5 of 12 Show all
Domain Details Per Protein
Protein Additional Resources Length Armadillo-like helical Armadillo-type fold HEAT repeat Helicase, C-terminal domain-like Helicase superfamily 1/2, ATP-binding domain Mot1, ATP-binding domain Mot1, central domain P-loop containing nucleoside triphosphate hydrolase SNF2-like, N-terminal domain superfamily SNF2, N-terminal SNF2/RAD5-like, C-terminal helicase domain TATA-binding protein-associated factor Mot1
UniProtKB:A0A8M2BGW0 InterPro 1861
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 13
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA btaf1-201 (1) Ensembl 5,574 nt
mRNA btaf1-202 (1) Ensembl 6,655 nt
ncRNA btaf1-002 (1) Ensembl 389 nt
ncRNA btaf1-003 (1) Ensembl 543 nt
ncRNA btaf1-004 (1) Ensembl 499 nt
1 - 5 of 5
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-129M12ZFIN Curated Data
Contained inBACDKEY-221J11ZFIN Curated Data
EncodesESTfb79b10Langenau et al., 2002
EncodesESTfd60h10
EncodesESTfe26c12
1 - 5 of 5
Show
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanBTAF110
Amino acid sequence comparison (2)
Conserved genome location (synteny) (1)
MouseBtaf119
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations