Gene

mdc1

ID

ZDB-GENE-060810-185

Name

mediator of DNA damage checkpoint 1

Symbol

mdc1 Nomenclature History

Previous Names

im:7163673 (1)
sb:eu278
si:ch73-309n4.5

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Orthologous to human MDC1 (mediator of DNA damage checkpoint 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

eu278 (1 image)
IMAGE:7163673 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With mdc1 Human Ortholog

No data available

Associated With mdc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000253	Forkhead-associated (FHA) domain
Domain	IPR001357	BRCT domain
Homologous_superfamily	IPR008984	SMAD/FHA domain superfamily
Homologous_superfamily	IPR036420	BRCT domain superfamily

Domain Details Per Protein

Protein	Length	BRCT domain	BRCT domain superfamily	Forkhead-associated (FHA) domain	SMAD/FHA domain superfamily
UniProtKB:A0A8N7T6W3 InterPro	1914

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	mdc1-202 (1) Ensembl	Havana	5527 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations