Gene

vps50

ID
ZDB-GENE-060503-325
Name
VPS50 EARP/GARPII complex subunit
Symbol
vps50 Nomenclature History
Previous Names
  • ccdc132
  • si:ch211-128d6.1
  • si:ch211-287b5.1
  • si:ch211-77k19.1
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to be involved in endocytic recycling and retrograde transport, endosome to Golgi. Predicted to localize to EARP complex. Is expressed in head and heart. Orthologous to human VPS50 (VPS50 subunit of EARP/GARPII complex).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Shi et al., 2019
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Shi et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With vps50 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neurodevelopmental disorder with microcephaly, seizures, and neonatal cholestasis 619685
Associated With vps50 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR019514 Syndetin, C-terminal
Domain IPR019515 Vacuolar protein sorting-associated protein 54, N-terminal
Family IPR040047 Syndetin
Domain Details Per Protein
Protein Length Syndetin Syndetin, C-terminal Vacuolar protein sorting-associated protein 54, N-terminal
UniProtKB:A0A8M9PD69 285
UniProtKB:F1R0A4 965
UniProtKB:A0A8M6YUM6 989
UniProtKB:A0A8M9Q2Y4 551
UniProtKB:A0A8M6Z2H2 990
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations