Gene

atg16l2

ID

ZDB-GENE-060503-197

Name

ATG16 autophagy related 16-like 2 (S. cerevisiae)

Symbol

atg16l2 Nomenclature History

Previous Names

si:ch211-152c12.1 (1)

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to be involved in autophagosome assembly and negative stranded viral RNA replication. Predicted to localize to autophagosome membrane. Orthologous to human ATG16L2 (autophagy related 16 like 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atg16l2 Human Ortholog

No data available

Associated With atg16l2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR013923	Autophagy-related protein 16 domain
Family	IPR045160	Autophagy-related protein 16
Repeat	IPR001680	WD40 repeat

Domain Details Per Protein

Protein	Length	Autophagy-related protein 16	Autophagy-related protein 16 domain	WD40 repeat
UniProtKB:A0A8M9PID7 InterPro	334

Transcripts

Genome Browsers

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	atg16l2-201 (1) Ensembl	Havana	1007 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations