Gene
scarb1
- ID
- ZDB-GENE-031126-1
- Name
- scavenger receptor class B, member 1
- Symbol
- scarb1 Nomenclature History
- Previous Names
-
- cb1015 (1)
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to localize to integral component of membrane. Is expressed in adaxial cell; segmental plate; somite; and yolk syncytial layer. Orthologous to human SCARB1 (scavenger receptor class B member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 11 figures from 6 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb1015 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Saunders et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| [High density lipoprotein cholesterol level QTL6] | 610762 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | CD36 family | CD36/scavenger receptor class B member 1 |
|---|---|---|---|
|
UniProtKB:A0A8M6Z8R4
|
511 | ||
|
UniProtKB:A0A0R4IRL8
|
496 | ||
|
UniProtKB:A0A0R4IQE0
|
505 | ||
|
UniProtKB:A0A0R4IDW0
|
492 |
| Type | Name | Annotation Method | Length (nt) | Analysis |
|---|---|---|---|---|
| aberrant processed transcript |
scarb1-206
(1)
|
Havana | 844 nt | |
| mRNA | scarb1-001_dup (1) | 1491 nt | ||
| mRNA |
scarb1-201
(1)
|
Havana | 773 nt | |
| mRNA |
scarb1-203
(1)
|
Havana | 436 nt | |
| mRNA |
scarb1-204
(1)
|
Havana | 2598 nt |
Interactions and Pathways
No data available
Plasmids
No data available