Gene
chd1
- ID
- ZDB-GENE-030131-7120
- Name
- chromodomain helicase DNA binding protein 1
- Symbol
- chd1 Nomenclature History
- Previous Names
-
- fc26h11
- fk85d05
- si:dkey-106m21.4
- wu:fc26h11
- wu:fk85d05 (1)
- zgc:173506
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to have ATP binding activity. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to human CHD1 (chromodomain helicase DNA binding protein 1).
- Genome Resources
- Note
-
corresponds to ENSDARG00000014878, Chr10
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Pilarowski-Bjornsson syndrome | 617682 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR023779 | Chromo domain, conserved site |
| Domain | IPR000330 | SNF2, N-terminal |
| Domain | IPR000953 | Chromo/chromo shadow domain |
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR023780 | Chromo domain |
| Domain | IPR025260 | Chromodomain-helicase-DNA-binding protein 1-like, C-terminal domain |
| Domain | IPR040793 | CDH1/2, SANT-Helical linker 1 |
| Homologous_superfamily | IPR016197 | Chromo-like domain superfamily |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR038718 | SNF2-like, N-terminal domain superfamily |
Domain Details Per Protein
| Protein | Length | CDH1/2, SANT-Helical linker 1 | Chromo/chromo shadow domain | Chromo domain | Chromo domain, conserved site | Chromodomain-helicase-DNA-binding protein 1-like, C-terminal domain | Chromo-like domain superfamily | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | SNF2-like, N-terminal domain superfamily | SNF2, N-terminal |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M3B604
|
1778 | |||||||||||
|
UniProtKB:A0A0R4IC05
|
1693 | |||||||||||
|
UniProtKB:A0A0R4IAE4
|
1777 |
Interactions and Pathways
No data available
Plasmids
No data available