Gene

arid1b

ID
ZDB-GENE-030131-4459
Name
AT-rich interactive domain 1B
Symbol
arid1b Nomenclature History
Previous Names
  • fd07d11
  • si:dkey-60a16.3
  • wu:fd07d11
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to contribute to nucleosome binding activity. Predicted to be involved in ATP-dependent chromatin remodeling; positive regulation of transcription, DNA-templated; and regulation of transcription by RNA polymerase II. Predicted to localize to SWI/SNF complex; nBAF complex; and nucleoplasm. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome; Coffin-Siris syndrome 1; intellectual disability; and neuroblastoma. Orthologous to human ARID1B (AT-rich interaction domain 1B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With arid1b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Coffin-Siris syndrome 1 Alliance Coffin-Siris syndrome 1 135900
Associated With arid1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001606 ARID DNA-binding domain
Domain IPR033388 SWI/SNF-like complex subunit BAF250, C-terminal
Domain IPR038040 AT-rich interactive domain-containing protein 1B, ARID domain
Family IPR021906 SWI/SNF-like complex subunit BAF250/Osa
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR016024 Armadillo-type fold
Homologous_superfamily IPR036431 ARID DNA-binding domain superfamily
Domain Details Per Protein
Protein Length ARID DNA-binding domain ARID DNA-binding domain superfamily Armadillo-like helical Armadillo-type fold AT-rich interactive domain-containing protein 1B, ARID domain SWI/SNF-like complex subunit BAF250, C-terminal SWI/SNF-like complex subunit BAF250/Osa
UniProtKB:A0A0R4ISW4 2122
UniProtKB:A0A2R8RJE4 2081
UniProtKB:A0A8M3B3X6 2123
UniProtKB:A0A8M2B764 2169
UniProtKB:A0A8M2B773 2170
UniProtKB:A0A8M2B7I1 2169
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations