Gene

satb2

ID
ZDB-GENE-070912-212
Name
SATB homeobox 2
Symbol
satb2 Nomenclature History
Previous Names
  • si:ch211-223c6.1
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have RNA polymerase II regulatory region sequence-specific DNA binding activity. Involved in epiboly involved in gastrulation with mouth forming second. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in chromosome 2q32-q33 deletion syndrome. Is expressed in fin; head; nervous system; pharyngeal endoderm; and pronephric duct. Orthologous to human SATB2 (SATB homeobox 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
15 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With satb2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
SATB2-associated syndrome Alliance Glass syndrome 612313
Associated With satb2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001356 Homeobox domain
Domain IPR003350 CUT domain
Domain IPR032355 SATB, CUT1-like DNA-binding domain
Domain IPR032392 SATB, ubiquitin-like oligomerisation domain
Family IPR039673 DNA-binding protein SATB1/SATB2
Homologous_superfamily IPR009057 Homeobox-like domain superfamily
Homologous_superfamily IPR010982 Lambda repressor-like, DNA-binding domain superfamily
Homologous_superfamily IPR038216 SATB, CUTL domain superfamily
Homologous_superfamily IPR038224 SATB, ULD domain superfamily
Domain Details Per Protein
Protein Length CUT domain DNA-binding protein SATB1/SATB2 Homeobox domain Homeobox-like domain superfamily Lambda repressor-like, DNA-binding domain superfamily SATB, CUT1-like DNA-binding domain SATB, CUTL domain superfamily SATB, ubiquitin-like oligomerisation domain SATB, ULD domain superfamily
UniProtKB:A8WIP9 834
UniProtKB:A0A8M2BFS5 981
UniProtKB:A0A8M6Z0X7 980
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations