Gene

tmtc1

ID

ZDB-GENE-070705-219

Name

transmembrane O-mannosyltransferase targeting cadherins 1

Symbol

tmtc1 Nomenclature History

Previous Names

si:ch73-1o10.3

Type

protein_coding_gene

Location

Chr: 4 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Orthologous to human TMTC1 (transmembrane O-mannosyltransferase targeting cadherins 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Thyme et al., 2019
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With tmtc1 Human Ortholog

No data available

Associated With tmtc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR013618	Protein O-mannosyl-transferase TMTC, DUF1736
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Repeat	IPR019734	Tetratricopeptide repeat

Domain Details Per Protein

Protein	Length	Protein O-mannosyl-transferase TMTC, DUF1736	Tetratricopeptide-like helical domain superfamily	Tetratricopeptide repeat
UniProtKB:F1QF84 InterPro	872
UniProtKB:A0A8M9Q1D5 InterPro	345

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	tmtc1-201 (1) Ensembl	Havana	8773 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations