Gene

pphln1

ID

ZDB-GENE-030131-1873

Name

periphilin 1

Symbol

pphln1 Nomenclature History

Previous Names

si:ch211-155a11.2
wu:fb83c09
zgc:158246

Type

protein_coding_gene

Location

Chr: 4 Mapping Details/Browsers

Description

Predicted to be involved in negative regulation of transcription, DNA-templated. Orthologous to human PPHLN1 (periphilin 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pphln1 Human Ortholog

No data available

Associated With pphln1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR028851	Periphilin-1

Domain Details Per Protein

Protein	Length	Periphilin-1
UniProtKB:A0A8M9Q633 InterPro	393
UniProtKB:A1A5V1 InterPro	362

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	pphln1-201 (1) Ensembl	Havana	1988 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pphln1-202 (1) Ensembl	Havana	807 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pphln1-203 (1) Ensembl	Havana	670 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pphln1-204 (1) Ensembl	Havana	596 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	pphln1-205 (1) Ensembl	Havana	764 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations